- Fix PLW2901: Use different variable name for stripped lines in loop
- Fix E721: Use 'is' instead of '==' for type comparisons
- Add noqa comments for intentional security warnings (S321, S507, S110, S603)
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Implement step timeout detection to prevent files from getting stuck in 'pending' state
- Add monitor_stalled_steps periodic task running every minute (Celery Beat)
- Automatically mark in-progress steps as failed if they exceed timeout (default: 10 minutes)
- Add step_timeout configuration setting (default: 600 seconds)
- Recover stalled steps with error message indicating when timeout was triggered
- Fix duplicate check to exclude self-comparison (file not duplicate of itself)
When processing crashes or hangs:
1. Worker detects stalled steps (in_progress for >10 minutes)
2. Marks them as failed with timeout error message
3. Updates UI to show failure status
4. Allows file to be retried or handled by user
This prevents files from being indefinitely stuck in processing state and provides
visibility into what went wrong.
- Add enable_deduplication and show_deduplication_step config options
- Rename hash_file step to check_for_duplicates
- Make deduplication step conditional based on configuration
- Add is_duplicate and duplicate_of_id fields to FileRecord model
- Create database migration for new deduplication fields
- Update process_document task to log deduplication results
- Update step visualization to show/hide step based on config
- Update status calculations to include deduplication step conditionally
- Default: deduplication enabled, step displayed
- Can be configured to hide from UI while still processing
- Add original_file_path and processed_file_path columns to FileRecord model
- Create database migration for new fields
- Implement get_unique_filepath_with_counter() with -0001 suffix format
- Update process_document to save immutable copy to /workdir/original
- Add force_cloud_ocr parameter to process_document for forced OCR
- Update embed_metadata to use new collision handling
- Update metadata JSON to include file path references
- Add /files/{file_id}/reprocess-with-cloud-ocr API endpoint
- Update processed_file_path in database during embedding
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Fix _compute_status_from_logs to track latest status per unique step
- Fix _compute_step_summary to count only latest status per step
- Add comprehensive tests for both fixes
- Resolves issue where completed files showed as "Processing"
- Resolves issue where metrics showed incorrect counts
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Created app/utils/file_queries.py with apply_status_filter function
- Updated app/api/files.py to use shared function
- Updated app/views/files.py to use shared function
- Removed unused 'or_' import from app/api/files.py
- Added comprehensive tests in tests/test_file_queries.py
- All tests pass (10 new tests, 14 existing tests verified)
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Add prominent documentation that splitting uses page boundaries
- Update docstring with IMPORTANT note about page-level splitting
- Add test to validate split PDFs are valid and readable
- Update ConfigurationGuide.md to emphasize page-based approach
- Update SECURITY_AUDIT.md with implementation details
- Ensures users understand no risk of corrupted PDFs
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Use BytesIO for size checking instead of temporary disk writes (major performance improvement)
- Add constant and comment for PDF overhead multiplier in tests
- Address code review feedback
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Add MAX_UPLOAD_SIZE config (default 1GB) to prevent resource exhaustion
- Add MAX_SINGLE_FILE_SIZE config for optional PDF file splitting
- Implement automatic PDF splitting when files exceed single file limit
- Update upload endpoint to use configured limits instead of hardcoded 500MB
- Add comprehensive tests for upload limits and file splitting
- Document configuration in ConfigurationGuide.md and SECURITY_AUDIT.md
- Reference SECURITY_AUDIT.md in error messages for user guidance
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Remove trailing whitespace from blank lines
- Apply black formatting to test file
- All tests still pass
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Import and use sanitize_filename utility in ui_upload endpoint
- Enhance sanitize_filename to handle Windows-style paths (backslashes)
- Add protection against path traversal patterns (..)
- Replace all path separators with underscores
- Add comprehensive security tests for Windows-style paths and mixed separators
- All existing tests pass with improved security
This addresses the "Uncontrolled data used in path expression" code scanning alert
by ensuring all user-provided filenames are properly sanitized before being used
in any file operations or stored in the database.
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Run Black formatter and isort on all app/ files
- Remove unused imports (F401) across multiple files
- Add # noqa: F401 for intentional re-exports in celery_worker.py,
tasks/__init__.py, utils.py, frontend.py, views/base.py
- Fix f-strings without placeholders (F541) in azure.py, notification.py,
check_credentials.py, upload_to_onedrive.py, settings.py
- Fix bare except (E722) in upload_to_sftp.py
- Fix block comment format (E265) in models.py
- Move imports to top of file to fix E402 in celery_app.py, celery_worker.py
- Fix line-too-long (E501) by wrapping strings in multiple files
- Remove unused variable (F841) in upload_to_nextcloud.py
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Use Optional[int] type hint for timeout parameter in oauth_helper
- Replace bare Exception with specific ValueError and JSONDecodeError
- Strengthen rclone remote name validation (must start with alphanumeric)
- Fix path traversal validation to check against workdir for absolute paths
- Add comprehensive comments for security validations
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Remove unused imports from all modified files
- Fix flake8 violations (unused variables, f-strings without placeholders)
- Apply Black formatting consistently
- Shorten long line in google_drive.py
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Convert require_admin_access to proper decorator pattern
- Fix redirect loop that was sending all users to /
- Add is_admin flag handling for OAuth users (checks groups)
- Update SETTING_METADATA with all 102 settings from config.py
- Improve API admin check with type hints
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Fixed status filtering to occur before pagination for correct counts
- Resolved N+1 query problem by batch-fetching processing statuses
- Extracted status computation logic to shared utility function
- Changed sort indicator from ⬍ to ↕ for better browser compatibility
- Updated both API and view layers to use shared status utilities
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
- Introduced new authentication settings in config.py including `auth_enabled`, `admin_username`, `admin_password`, and `session_secret`.
- Added validation for `session_secret` to ensure it meets security requirements when authentication is enabled.
- Updated main.py to conditionally mount static files and log warnings if the directory is not found.
- Removed unused email template files and added new authentication and notification setup documentation.
- Implemented authentication configuration validation in validators.py and updated settings display.
- Enhanced the user interface with a new login template and SVG assets for branding.
- Added comprehensive guides for setting up authentication and notifications in the documentation.
- Implemented `google_drive_callback.html` for processing Google Drive authorization, including UI for success and error states.
- Added JavaScript functionality for exchanging authorization codes, saving settings, and handling folder selection.
- Created `google_drive_callback_error.html` to display error messages during the authorization process.
copilot-swe-agent[bot]