Commit Graph

95 Commits

Author SHA1 Message Date
copilot-swe-agent[bot] 4fdb1b8d85 fix: address code review feedback - restrict terminal step check to success only, add test assertions
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-27 16:39:32 +00:00
copilot-swe-agent[bot] 2c55f076be fix(tasks): resolve files stuck in Pending status despite completed processing
The status calculation required ALL steps to be explicitly marked as
success/skipped before a file could be "completed". This failed for
dynamic pipelines where:

1. check_for_duplicates was logged before the file record existed (no
   file_id), so its FileProcessingStep was never updated from "pending"
2. extract_text was not marked as "skipped" for non-PDF files that go
   through PDF conversion first

Fix:
- Move check_for_duplicates success log to after initialize_file_steps()
  with the correct file_id so the step actually gets updated
- Mark extract_text as "skipped" for non-PDF files
- Add terminal-step fallback: if send_to_all_destinations is "success",
  the file is "completed" even if intermediate steps remain "pending"
  (handles any other dynamic pipeline edge cases)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-27 16:38:10 +00:00
copilot-swe-agent[bot] baa412b172 fix(status): simplify terminal step guard condition in get_step_summary
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-27 00:52:48 +00:00
copilot-swe-agent[bot] e6dd39c27d fix(status): prevent false Completed status when mandatory pipeline steps have not run
Add a terminal-step guard (send_to_all_destinations) to all status
calculation paths so that files are only marked Completed once the
entire processing pipeline has been recorded.

- get_file_overall_status: require TERMINAL_STEP to be present
- get_files_processing_status: same guard for bulk status
- get_step_summary: count missing terminal step as queued so
  total_main_steps > main_completed when pipeline is incomplete
- apply_status_filter: SQL sub-query requires terminal step for
  completed filter
- process_document: call initialize_file_steps after creating a new
  file record so all mandatory steps are pre-created as pending

Define TERMINAL_STEP constant in step_manager.py and reference it in
file_status.py and file_queries.py to avoid magic strings.

Tests updated: add send_to_all_destinations to completed-file
fixtures; add test verifying initialize_file_steps is called for
new files.

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-27 00:51:14 +00:00
copilot-swe-agent[bot] a05690bd5f feat(upload): adaptive 429 backoff, full Gotenberg file types, directory traversal
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-26 23:24:26 +00:00
copilot-swe-agent[bot] 35d2ed05e9 feat(upload): add directory traversal, queue throttling, and upload config settings
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-26 23:11:44 +00:00
copilot-swe-agent[bot] ffa0e1eb7b test(coverage): add celery_worker coverage and remove dead config_validator.py
- Rewrite tests/test_celery_worker.py to mock check_credentials.apply_async
  at import time, enabling all 35 statements to be covered without Redis
- Add tests for conditional beat schedule entries (IMAP, Uptime Kuma)
- Delete app/utils/config_validator.py — dead code shadowed by the
  config_validator/ package directory (Python gives packages precedence)
- Remove both files from coverage omit in pyproject.toml
- celery_worker.py now at 100% coverage (was 0%)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 21:08:24 +00:00
Christian Krakau-Louis 9584c0263c Merge pull request #408 from christianlouis/copilot/audit-documentation-gaps
fix(mypy): add missing type annotations in meilisearch_client.py
2026-02-25 15:18:51 +01:00
copilot-swe-agent[bot] 07e7b49ac8 fix(mypy): add missing type annotations in meilisearch_client.py
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 14:13:13 +00:00
copilot-swe-agent[bot] c428a7ec00 feat(ui): add dark mode support with system preference detection and localStorage persistence
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 13:59:49 +00:00
github-actions[bot] 093076515e style: apply ruff auto-fix
- Auto-formatted code with ruff format
- Applied ruff linting fixes with --fix

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
2026-02-25 13:39:01 +00:00
copilot-swe-agent[bot] a08bfb9f1a feat(helm): add Helm chart for Kubernetes deployment and update DeploymentGuide
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 13:31:54 +00:00
copilot-swe-agent[bot] ff96340154 fix(config): default meilisearch_url to http://meilisearch:7700 for Docker/K8s service discovery
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 13:27:09 +00:00
copilot-swe-agent[bot] 89d5df71c8 feat(ocr): fine-tune OCR quality criteria with stricter threshold and head-to-head comparison
- Raise quality acceptance threshold from 65→85 (configurable via TEXT_QUALITY_THRESHOLD)
- Reject text with significant issues (excessive_typos, garbage_characters,
  incoherent_text, fragmented_sentences) even when score is above threshold
  (configurable via TEXT_QUALITY_SIGNIFICANT_ISSUES)
- Add compare_text_quality() for AI-powered head-to-head comparison of
  original embedded text vs fresh OCR output
- Update process_document to pass original text to OCR task for comparison
- Update process_with_ocr to run comparison and keep the higher-quality text
- Add new settings to settings_service.py metadata
- Update docs/ConfigurationGuide.md with new settings
- Add comprehensive tests for new threshold and comparison logic

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-25 13:03:21 +00:00
copilot-swe-agent[bot] 37a3f7aae7 fix(ocr): sync workflow steps with process_with_ocr replacing legacy azure step
- Update _compute_processing_flow to recognize process_with_ocr as the OCR
  stage and remap legacy process_with_azure_document_intelligence log entries
  for backward compatibility
- Normalize legacy OCR step name in _compute_step_summary log fallback
- Add process_with_ocr to REAL_MAIN_STEPS/REAL_STEPS in step_manager,
  file_status, and file_queries (keeping legacy name for old DB entries)
- Update retry logic in api/files.py to retry failed OCR via process_with_ocr
  (handles both step names as aliases)
- Fix process_document.py to log process_with_ocr as skipped (not azure step)
  for the local text extraction path

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 22:22:06 +00:00
copilot-swe-agent[bot] 0c500e1ec6 fix(ocr): address code review: add model fallback default, remove unused variable
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 18:44:20 +00:00
copilot-swe-agent[bot] b03bfb5e02 feat(ocr): add AI-based embedded text quality check with automatic OCR fallback
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 18:41:27 +00:00
copilot-swe-agent[bot] 2b2a97c2fa fix(ocr): ensure Tesseract language data for embed_text_layer regardless of active OCR provider
Root cause: ensure_ocr_languages_from_settings() only downloaded tessdata
when the 'tesseract' provider was active, but embed_text_layer() uses
ocrmypdf (which needs tessdata) as a fallback for ALL OCR providers.

- embed_text_layer(): call ensure_tesseract_languages(language) after
  confirming ocrmypdf is on PATH, so language data is present before
  ocrmypdf is invoked (prevents exit code 3 for fra/deu/etc.)
- ensure_ocr_languages_from_settings(): extend the condition from
  'tesseract' in active_providers to also trigger when ocrmypdf is
  on PATH, enabling proactive pre-download at startup for any config
- Tests: mock shutil.which and ensure_tesseract_languages in affected
  test cases; rename azure-only test and add new test for ocrmypdf case

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 18:02:19 +00:00
copilot-swe-agent[bot] 8a2a4dc2b3 feat(ocr): auto-install Tesseract/EasyOCR languages from settings
- Add app/utils/ocr_language_manager.py: detects tessdata dir, downloads
  missing .traineddata files via wget/curl from tessdata_fast GitHub repo,
  pre-downloads EasyOCR models, exposes async background-thread helper
- TesseractOCRProvider.process() calls ensure_tesseract_languages() before
  running pytesseract; raises clear error if languages remain unavailable
- EasyOCRProvider.process() logs informational message when models download
- app/main.py: calls ensure_ocr_languages_async() at startup
- app/utils/settings_sync.py: triggers language re-check after every
  settings reload so UI changes take effect without container restart
- app/api/settings.py: adds POST /api/settings/install-ocr-languages
  endpoint for on-demand language installation from the admin UI
- Dockerfile: adds wget for runtime tessdata downloads
- docs/ConfigurationGuide.md: documents automatic language download
- tests/test_ocr_language_manager.py: 29 unit tests

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 16:28:14 +00:00
copilot-swe-agent[bot] 50573ec7be fix(ocr): address code review - add subprocess security comment and type hints in tests
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 13:22:39 +00:00
copilot-swe-agent[bot] fec032643b feat(ocr): embed searchable text layer for providers without native PDF output
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 13:19:52 +00:00
copilot-swe-agent[bot] c7423834d5 fix(ocr): rewrite MistralOCRProvider to use native Mistral OCR API
- PDFs are now uploaded to Mistral Files API (POST /v1/files) and
  processed via a signed document_url, resolving the 422 error caused
  by passing data:application/pdf;base64,... to an image endpoint
- Images (JPEG/PNG/GIF/WEBP/BMP/TIFF) use base64 image_url directly
- Unsupported MIME types raise a clear ValueError
- Magic-byte fallback detects PDFs with no file extension
- Switches from openai chat completions to requests HTTP calls
- Adds helper method _upload_pdf_and_get_document()
- Adds TestMistralOCRProvider with 9 unit tests covering all paths

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-24 12:13:38 +00:00
Christian Krakau-Louis 4cc9233524 Merge branch 'main' into copilot/add-self-hosted-ocr-support 2026-02-23 23:51:43 +01:00
copilot-swe-agent[bot] a94b52ee14 feat(ai): handle temperature incompatibility for gpt-5 and o-series models, add model picker UI
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 22:12:08 +00:00
github-actions[bot] 5ee3d8cd84 style: apply ruff auto-fix
- Auto-formatted code with ruff format
- Applied ruff linting fixes with --fix

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
2026-02-23 21:24:11 +00:00
copilot-swe-agent[bot] 631d43c664 fix(ocr): set default OCR languages to English + German (eng+deu / en,de)
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 21:02:07 +00:00
copilot-swe-agent[bot] 1f843fe460 feat(ocr): add self-hosted OCR engine support (Tesseract, EasyOCR) with multi-provider cross-checking
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 20:59:43 +00:00
copilot-swe-agent[bot] 044da0ff47 feat: update all OpenAI/ChatGPT refs + settings dropdown for fixed-value fields
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 20:06:57 +00:00
copilot-swe-agent[bot] dcdef44303 feat: add Portkey provider support and null-content guard to AI abstraction layer
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 19:42:03 +00:00
copilot-swe-agent[bot] d4c7fb26ac feat: add AI provider abstraction layer with OpenAI, Azure, Anthropic, Gemini, Ollama, OpenRouter, LiteLLM support
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 19:26:45 +00:00
copilot-swe-agent[bot] efb3fa7d6c fix(config): decrypt sensitive settings when loading from database
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 12:54:34 +00:00
copilot-swe-agent[bot] 862ba99802 fix(settings): rollback restores old_value instead of new_value and supports deletion fallback
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 12:15:44 +00:00
copilot-swe-agent[bot] 96fd0b8dd5 feat(settings): patch API in-memory settings on save and add Back to ENV button
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 11:42:37 +00:00
copilot-swe-agent[bot] 0188575c27 fix: isolate token_hex mock to wizard module and fix mypy annotation
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 10:01:07 +00:00
github-actions[bot] 540541eec6 style: apply ruff auto-fix
- Auto-formatted code with ruff format
- Applied ruff linting fixes with --fix

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
2026-02-23 09:33:48 +00:00
copilot-swe-agent[bot] ecc8100e24 feat(settings): persist storage provider settings to DB, add export endpoint, enrich setup wizard
- dropbox/google_drive/onedrive save-settings: switch to DB as primary,
  .env write as best-effort (no longer fails when .env is absent)
- onedrive/google_drive update-settings: persist changes to DB alongside
  in-memory update; call notify_settings_updated()
- onedrive test_onedrive_token: persist rotated refresh token to DB
- settings_service: add get_settings_for_export() (db / effective modes)
- settings API: add GET /api/settings/export-env (admin-only, downloads .env)
- wizard: enrich settings with current values (DB > ENV > default) and
  value_source badges; pass setup_skipped to template; call
  notify_settings_updated() on save; add /setup/undo-skip route
- setup_wizard.html: pre-populate inputs with current_value; show
  DB/ENV/DEFAULT source badges; skip/undo-skip messaging
- settings.html: replace single Audit Log button with Setup Wizard link,
  Export .env dropdown, and Audit Log button group

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
2026-02-23 02:41:04 +00:00
copilot-swe-agent[bot] 90e5e0037c feat(settings): per-option save, live worker sync, audit log, and rollback
A) Per-option Save Button
- Add per-setting Save button in settings.html (visible only when value changed)
- Button calls POST /api/settings/{key} directly; existing bulk Save retained
- Add Audit Log link in settings page header

B) Immediate Worker Sync
- New app/utils/settings_sync.py with notify_settings_updated() (Redis version key)
  and register_settings_reload_signal() (Celery task_prerun handler)
- Register signal in celery_worker.py at startup
- All API write paths call notify_settings_updated() after successful saves

C) Audit Log
- Add SettingsAuditLog model (key, old_value, new_value, changed_by, changed_at, action)
- save_setting_to_db / delete_setting_from_db accept changed_by and write audit entries
- New get_audit_log() service function (masks sensitive values)
- New GET /api/settings/audit-log endpoint (admin-only)
- New GET /admin/settings/audit-log view + audit_log.html template
- Visible to all admins (per clarified requirement)

D) Config Rollback / History
- New get_setting_history() and rollback_setting() service functions
- New GET /api/settings/{key}/history endpoint
- New POST /api/settings/{key}/rollback/{history_id} endpoint
- Rollback buttons in audit_log.html with confirmation dialog
- Tests: 25 new tests covering audit log, rollback, worker sync helpers, and API endpoints

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-23 02:28:08 +00:00
copilot-swe-agent[bot] e632e0333f fix(api): return 200 with value=None for unknown setting keys in GET endpoint
`GET /api/settings/{key}` was calling `validate_setting_key()` which raises
HTTP 404 for keys not in SETTING_METADATA. The test expects 200 with value=None
for unknown keys.

Added `validate_setting_key_format()` to `input_validation.py` that validates
only the key format without the SETTING_METADATA existence check. Updated
`get_setting` to use the format-only validator; POST/DELETE endpoints continue
using the full `validate_setting_key()` for write-side security.

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-22 20:04:57 +00:00
copilot-swe-agent[bot] 3035802c16 feat(security): add comprehensive input validation and sanitization (#172)
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-22 16:02:00 +00:00
copilot-swe-agent[bot] 886bcd3c9b fix: include exc_info in log_task_progress debug message
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-17 11:41:56 +00:00
copilot-swe-agent[bot] 13a3c41482 fix: make log_task_progress resilient to DB errors and fix test assertions
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-17 11:40:34 +00:00
copilot-swe-agent[bot] 53a9efa56d feat: add strict mypy type-checking for app/utils/ module
- Add [[tool.mypy.overrides]] section for app/utils/** with disallow_untyped_defs=true
- Add type annotations to all functions in app/utils/ (12 files)
- Fix type annotations in app/config.py and app/database.py (imported by utils)
- All 85 source files now pass mypy type checking

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-14 00:27:52 +00:00
copilot-swe-agent[bot] fc4f5631ee test: increase coverage for imap_tasks.py and fix config_validator.py
- Add comprehensive tests for imap_tasks.py covering:
  - Lock acquire/release mechanisms
  - pull_all_inboxes task with various scenarios
  - pull_inbox for Gmail and non-Gmail with edge cases
  - find_all_mail_xlist functionality
  - Extended fetch_attachments tests for all MIME types
  - Edge cases: invalid JSON, missing Message-ID, already processed, etc.
- Achieve 98.26% coverage for imap_tasks.py (up from 48.78%)

- Fix config_validator.py to include validate_auth_config export
- Update tests to verify all exports including validate_auth_config
- Note: config_validator.py file is shadowed by config_validator/ directory
  in Python's module resolution, so it cannot be directly imported or tested.
  The package's __init__.py (which has 100% coverage) is what's actually used.

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-13 23:42:49 +00:00
copilot-swe-agent[bot] b42c6f5f64 fix: resolve all Ruff linting errors
- Fix PLW2901: Use different variable name for stripped lines in loop
- Fix E721: Use 'is' instead of '==' for type comparisons
- Add noqa comments for intentional security warnings (S321, S507, S110, S603)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-13 16:12:39 +00:00
copilot-swe-agent[bot] 4897cb6655 fix: apply Phase 1-2 correctness and constant extraction from PR #273
- Replace datetime.utcnow() with datetime.now(timezone.utc) in 4 files
- Extract duplicate literals to constants in 5 files
  - models.py: "files.id" → _FILES_ID_FK
  - upload_to_email.py: "logo.png" → _LOGO_FILENAME
  - general.py: "%B %d, %Y" → _DATE_DISPLAY_FORMAT
  - files.py: "File not found" → _FILE_NOT_FOUND
  - upload_to_google_drive.py: Google token URL → _GOOGLE_TOKEN_URL

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-13 11:25:30 +00:00
copilot-swe-agent[bot] 43bc58770d refactor: consolidate linting tools into Ruff
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-13 09:10:52 +00:00
copilot-swe-agent[bot] dff32e08e1 test: add comprehensive tests for critical untested files and fix deprecated warnings
- Add tests for migrate_logs_to_steps.py, upload_to_paperless.py, dropbox API,
  upload_to_dropbox.py, upload_to_nextcloud.py, upload_to_onedrive.py,
  upload_with_rclone.py, and config_validator.py
- Fix PydanticDeprecatedSince20: @validator → @field_validator in config.py, url_upload.py
- Fix PydanticDeprecatedSince20: class Config → model_config = SettingsConfigDict
- Fix PydanticDeprecatedSince211: filter Pydantic internals in settings_display.py
- Fix MovedIn20Warning: use sqlalchemy.orm.declarative_base instead of ext.declarative

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-12 17:32:17 +00:00
copilot-swe-agent[bot] ff9a3ff49f style: fix code formatting with black, isort, and flake8
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-12 03:21:41 +00:00
copilot-swe-agent[bot] cc98039246 fix(deps): upgrade PyPDF2 to pypdf >= 3.9.0 to fix CVE-2023-36464
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-12 02:52:17 +00:00
Christian Krakau-Louis 9a2c2d20b1 feat(duplication): implement duplicate file handling and detection across processing steps 2026-02-12 02:38:00 +01:00