Commit Graph

225 Commits

Author SHA1 Message Date
Christian Krakau-Louis 9a2c2d20b1 feat(duplication): implement duplicate file handling and detection across processing steps 2026-02-12 02:38:00 +01:00
Christian Krakau-Louis 70757e5644 feat(step-timeout): add automatic recovery for stalled processing steps
- Implement step timeout detection to prevent files from getting stuck in 'pending' state
- Add monitor_stalled_steps periodic task running every minute (Celery Beat)
- Automatically mark in-progress steps as failed if they exceed timeout (default: 10 minutes)
- Add step_timeout configuration setting (default: 600 seconds)
- Recover stalled steps with error message indicating when timeout was triggered
- Fix duplicate check to exclude self-comparison (file not duplicate of itself)

When processing crashes or hangs:
1. Worker detects stalled steps (in_progress for >10 minutes)
2. Marks them as failed with timeout error message
3. Updates UI to show failure status
4. Allows file to be retried or handled by user

This prevents files from being indefinitely stuck in processing state and provides
visibility into what went wrong.
2026-02-12 02:38:00 +01:00
Christian Krakau-Louis 7bbd095152 fix(deduplication): handle UNIQUE constraint violation for duplicate files
- Remove duplicate record creation to avoid UNIQUE constraint on filehash
- When duplicate detected, return original file_id instead of creating new record
- Avoids sqlite3.IntegrityError: UNIQUE constraint failed
- Simpler approach: duplicates not tracked as separate records, just rejected
- Revert filehash column back to NOT NULL (required for original files)
- Fixes error: (sqlite3.IntegrityError) UNIQUE constraint failed: files.filehash
2026-02-12 02:38:00 +01:00
Christian Krakau-Louis 974dd64660 fix(database): add runtime schema migrations for deduplication columns
- Implement lightweight migration system for is_duplicate and duplicate_of_id columns
- Migrations run automatically on application startup
- Idempotent migrations safe to run multiple times
- Fixes SQLite OperationalError for missing columns
- Resolves issue where database schema didn't match model definitions
2026-02-12 02:38:00 +01:00
Christian Krakau-Louis 4c11cfd6dd feat(deduplication): implement configurable duplicate file detection
- Add enable_deduplication and show_deduplication_step config options
- Rename hash_file step to check_for_duplicates
- Make deduplication step conditional based on configuration
- Add is_duplicate and duplicate_of_id fields to FileRecord model
- Create database migration for new deduplication fields
- Update process_document task to log deduplication results
- Update step visualization to show/hide step based on config
- Update status calculations to include deduplication step conditionally
- Default: deduplication enabled, step displayed
- Can be configured to hide from UI while still processing
2026-02-12 02:38:00 +01:00
Christian Krakau-Louis 83c65f3c40 feat: enhance processing status tracking and UI display for file details 2026-02-12 01:07:22 +01:00
Christian Krakau-Louis 02e1445e01 Enhance file detail page with original and processed file previews, GPT metadata display, and text extraction functionality
- Added endpoints for previewing original and processed PDF files.
- Implemented on-demand text extraction from original and processed PDFs.
- Updated file detail page to show original and processed file paths with existence status.
- Introduced GPT metadata display with a collapsible JSON view.
- Enhanced front-end with PDF.js for in-browser PDF rendering and improved user experience.
- Added integration tests for new features including metadata display and file previews.
2026-02-11 23:32:29 +01:00
Christian Krakau-Louis 7222740204 feat(auth): add configurable admin group name for OAuth user access 2026-02-11 22:53:13 +01:00
Christian Krakau-Louis 50cc0035d9 feat(database): add file path columns to files table during migration
fix(general): update processed files count query to use FileRecord.id

chore: add VSCode settings for pytest configuration
2026-02-11 22:39:21 +01:00
copilot-swe-agent[bot] 952e27b339 test: add tests for storage reorganization features
- Add tests for get_unique_filepath_with_counter collision handling
- Add tests for immutable original storage
- Add tests for metadata augmentation with file paths
- Add tests for force_cloud_ocr parameter
- Verify existing process_document tests still pass

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 20:13:17 +00:00
copilot-swe-agent[bot] 73a0222e56 feat(storage): implement immutable original/processed file storage and collision handling
- Add original_file_path and processed_file_path columns to FileRecord model
- Create database migration for new fields
- Implement get_unique_filepath_with_counter() with -0001 suffix format
- Update process_document to save immutable copy to /workdir/original
- Add force_cloud_ocr parameter to process_document for forced OCR
- Update embed_metadata to use new collision handling
- Update metadata JSON to include file path references
- Add /files/{file_id}/reprocess-with-cloud-ocr API endpoint
- Update processed_file_path in database during embedding

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 20:10:19 +00:00
copilot-swe-agent[bot] 65b6dc6985 feat: Add comprehensive tests and migration utility for status table
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 19:48:17 +00:00
copilot-swe-agent[bot] ad74bc852d feat: Add explicit FileProcessingStep table for status tracking
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 19:45:09 +00:00
copilot-swe-agent[bot] 52b65868a4 refactor: Address code review feedback - remove redundant imports and use _ for unused variables
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 19:42:17 +00:00
copilot-swe-agent[bot] d8d4294ff0 fix: Make _compute_step_summary order-independent to fix dashboard status bug
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 19:38:29 +00:00
copilot-swe-agent[bot] 4fb696e1eb fix: correct file status and metrics to use latest status per step
- Fix _compute_status_from_logs to track latest status per unique step
- Fix _compute_step_summary to count only latest status per step
- Add comprehensive tests for both fixes
- Resolves issue where completed files showed as "Processing"
- Resolves issue where metrics showed incorrect counts

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 18:33:41 +00:00
copilot-swe-agent[bot] 5e82f7c03a refactor: fix static method warnings, hard-coded credentials, and Annotated type hints
- Add @staticmethod to 9 test methods in test_external_integrations.py
  that don't use self (PYL-R0201)
- Extract hard-coded password literals to constants in 6 test files
  to resolve S2068 warnings (fixtures_integration, test_imap_tasks,
  test_upload_tasks, test_upload_webdav_comprehensive,
  test_upload_webdav_integration, test_views_coverage)
- Migrate Form() dependency injection to Annotated type hints in
  dropbox.py, google_drive.py, onedrive.py (Sonar fastapi convention)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 17:03:54 +00:00
copilot-swe-agent[bot] 3a40fe59f5 refactor(api): migrate Depends() to Annotated type hint style in app/api/
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 16:54:55 +00:00
copilot-swe-agent[bot] 037b4aa94e fix(build): sync VERSION file with semantic-release tags and add build time
- Update generate_build_metadata.sh to sync VERSION from latest git tag
- Change BUILD_DATE format from date-only to ISO 8601 with time (YYYY-MM-DDTHH:MM:SSZ)
- Fix VERSION file from 0.5.0 to 0.9.1 (matching latest git tag v0.9.1)
- Change version fallback from hardcoded '0.5.0-dev' to 'unknown' in config.py
- Update release.yml to commit all build metadata files (not just VERSION)
- Update BuildMetadata.md documentation to reflect automated versioning
- Add tests for build_date with time format and version unknown fallback

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 14:42:37 +00:00
copilot-swe-agent[bot] 9cd7a80cbc fix(api): add Request parameter to process_url endpoint for session access
The @require_login decorator expects a Starlette Request as the first
parameter to access request.session, but process_url only had a
URLUploadRequest Pydantic model parameter. This caused an
AttributeError: 'URLUploadRequest' object has no attribute 'session'
when POST /api/process-url was called.

Fix: Add `request: Request` as the first parameter and rename the
Pydantic model parameter from `request` to `url_request`.

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 14:25:57 +00:00
copilot-swe-agent[bot] 47a1de953d refactor: address code review comments
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 13:39:35 +00:00
copilot-swe-agent[bot] 245e298991 feat: add URL-based file upload with SSRF protection
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 13:36:23 +00:00
copilot-swe-agent[bot] 2b2394f858 fix: pass task_id to check_page_rotation helper for consistent log prefixing
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 10:15:08 +00:00
copilot-swe-agent[bot] 6f286e37b3 feat(tasks): add detailed logging to upload_with_rclone task functions
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 10:06:51 +00:00
copilot-swe-agent[bot] 14eacc7c23 feat(tasks): add detailed logging to rotate_pdf_pages task
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 10:02:25 +00:00
copilot-swe-agent[bot] 4153c5bbcb feat(tasks): add detailed logging to refine_text_with_gpt task
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 09:57:46 +00:00
copilot-swe-agent[bot] acec9954a0 feat(tasks): add detailed logging to Azure Document Intelligence task
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 09:54:53 +00:00
copilot-swe-agent[bot] 3e78ee4c27 fix(logging): address code review feedback for TaskLogCollector robustness
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 09:15:44 +00:00
copilot-swe-agent[bot] dfa4b16776 feat(tasks): auto-capture worker log output for all tasks via TaskLogCollector
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 09:13:09 +00:00
copilot-swe-agent[bot] b18f5ee13c feat(ui): add verbose worker log detail to processing history on file detail page
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 09:06:30 +00:00
copilot-swe-agent[bot] f7799e409d fix(tasks): prevent filename overwrite in extract_metadata_with_gpt and fix embed retry logic
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-11 08:59:27 +00:00
copilot-swe-agent[bot] afb4d9bf85 refactor(api): address code review feedback - extract PDF text helper, improve comments
- Extract duplicated PDF text extraction into _extract_text_from_pdf helper
- Clarify empty metadata dict comment for embed_metadata_into_pdf retry
- Make test assertion for file_id passing more explicit

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 21:11:46 +00:00
copilot-swe-agent[bot] 11c7d15a90 fix(tasks): skip duplicate check when reprocessing and enable retry from failed pipeline step
- Add file_id parameter to process_document to skip duplicate hash check on reprocess
- Pass file_id from reprocess_single_file and bulk_reprocess_files endpoints
- Extend retry-subtask endpoint to support pipeline steps (process_document,
  process_with_azure_document_intelligence, extract_metadata_with_gpt,
  embed_metadata_into_pdf) in addition to upload tasks
- Add retry button for failed main pipeline steps in file detail UI
- Add comprehensive tests for reprocessing and pipeline step retry

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 21:09:53 +00:00
copilot-swe-agent[bot] 8edc11da04 refactor: extract shared file-status query logic into utility function
- Created app/utils/file_queries.py with apply_status_filter function
- Updated app/api/files.py to use shared function
- Updated app/views/files.py to use shared function
- Removed unused 'or_' import from app/api/files.py
- Added comprehensive tests in tests/test_file_queries.py
- All tests pass (10 new tests, 14 existing tests verified)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 20:40:11 +00:00
copilot-swe-agent[bot] 403cd02428 feat: Adjust rate limits per feedback - increase uploads to 600/minute, remove processing limit
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 20:29:26 +00:00
copilot-swe-agent[bot] 7480c70de4 plan: Adjust rate limits based on feedback
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 20:26:21 +00:00
copilot-swe-agent[bot] 8d347e0a53 feat: Add rate limiting middleware with SlowAPI
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 16:17:53 +00:00
copilot-swe-agent[bot] 9a89f70cf4 fix: change SFTP host key verification default to secure (False)
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 15:39:23 +00:00
copilot-swe-agent[bot] 742b4e2e8c refactor: improve code quality and documentation clarity
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 15:04:48 +00:00
copilot-swe-agent[bot] 6aeb466491 fix: address code review feedback for custom fields
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 15:02:05 +00:00
copilot-swe-agent[bot] 327244c43a feat(paperless): add flexible multi-field custom fields mapping
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 15:00:28 +00:00
copilot-swe-agent[bot] eab75b89db feat(paperless): add support for setting absender custom field
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 14:54:42 +00:00
copilot-swe-agent[bot] 956f0c0c2a refactor: change security headers default to disabled
Security headers are now disabled by default since most deployments use a reverse proxy (Traefik, Nginx) that already adds these headers. Enable with SECURITY_HEADERS_ENABLED=true for direct deployments.

Changes:
- Set security_headers_enabled default to False in app/config.py
- Update all documentation to reflect new default
- Comment out examples in .env.demo (now showing disabled state)
- Update SECURITY_AUDIT.md to reflect reverse proxy as default deployment
- Tests still pass (3 passed, 8 skipped as expected with headers disabled)

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 14:22:47 +00:00
copilot-swe-agent[bot] 68ee832e70 style: format code with Black
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 14:08:24 +00:00
copilot-swe-agent[bot] e144fdd50a feat(security): add configurable security headers middleware
- Add SecurityHeadersMiddleware with HSTS, CSP, X-Frame-Options, X-Content-Type-Options
- Add configuration options in app/config.py
- Integrate middleware into app/main.py
- Add comprehensive tests in tests/test_security_headers.py
- Update .env.demo with security header examples
- Update docs/DeploymentGuide.md with security headers section and Traefik/Nginx examples
- Update docs/ConfigurationGuide.md with detailed configuration reference
- Update SECURITY_AUDIT.md to mark security headers implementation complete

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 14:05:19 +00:00
copilot-swe-agent[bot] f4b4ab0328 docs: clarify PDF splitting is page-based, not byte-based
- Add prominent documentation that splitting uses page boundaries
- Update docstring with IMPORTANT note about page-level splitting
- Add test to validate split PDFs are valid and readable
- Update ConfigurationGuide.md to emphasize page-based approach
- Update SECURITY_AUDIT.md with implementation details
- Ensures users understand no risk of corrupted PDFs

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 13:51:24 +00:00
copilot-swe-agent[bot] dec7afe712 refactor: extract condition to variable for readability
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 11:01:56 +00:00
copilot-swe-agent[bot] 03222c5ef1 refactor: improve file splitting performance and code quality
- Use BytesIO for size checking instead of temporary disk writes (major performance improvement)
- Add constant and comment for PDF overhead multiplier in tests
- Address code review feedback

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 10:59:39 +00:00
copilot-swe-agent[bot] ee43687eaa test: fix formatting and linting issues in file upload tests
Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 10:56:54 +00:00
copilot-swe-agent[bot] 9ad32e40e6 feat(security): add configurable file upload size limits with optional splitting
- Add MAX_UPLOAD_SIZE config (default 1GB) to prevent resource exhaustion
- Add MAX_SINGLE_FILE_SIZE config for optional PDF file splitting
- Implement automatic PDF splitting when files exceed single file limit
- Update upload endpoint to use configured limits instead of hardcoded 500MB
- Add comprehensive tests for upload limits and file splitting
- Document configuration in ConfigurationGuide.md and SECURITY_AUDIT.md
- Reference SECURITY_AUDIT.md in error messages for user guidance

Co-authored-by: christianlouis <361235+christianlouis@users.noreply.github.com>
2026-02-10 10:51:30 +00:00